Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs70977272 | chr6:26361656 | ATTTTTTT/A | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs70983923 | chr6:27914359 | AAATGAACTGAAGGAGAGGTCCC/A | 4.74E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs71031811 | chr10:70693515 | AC/A | 6.91E-9 | 214 | 15.07 | 17 | 10.6 | KM Plot |
| KIRP | rs71045894 | chr1:63804719 | T/TC | 3.74E-6 | 208 | 14.1 | 18.95 | 8.03 | KM Plot |
| KIRP | rs7104943 | chr11:34935122 | G/A | 4.21E-12 | 213 | 17.08 | 13.17 | 5.57 | KM Plot |
| KIRP | rs7104984 | chr11:34965408 | C/T | 4.8E-12 | 213 | 17.08 | 12.02 | 5.57 | KM Plot |
| KIRP | rs7110486 | chr11:34879987 | T/A | 0 | 212 | 16.5 | 13.85 | 3.83 | KM Plot |
| KIRP | rs7115242 | chr11:116908283 | C/T | 0.000321 | 214 | 16.43 | 15.28 | 11.43 | KM Plot |
| KIRP | rs71206067 | chr6:26903379 | C/T | 3.22E-7 | 211 | 15.88 | 11.67 | 9.77 | KM Plot |
| KIRP | rs7126852 | chr11:22361077 | A/G | 5.86E-6 | 208 | 14.85 | 18.03 | 4.07 | KM Plot |
| KIRP | rs7128398 | chr11:22326143 | A/G | 3.14E-6 | 211 | 2.52 | 20.05 | 15.07 | KM Plot |
| KIRP | rs7129830 | chr11:34930239 | T/C | 4.21E-12 | 213 | 17.08 | 13.17 | 5.57 | KM Plot |
| KIRP | rs71311962 | chr1:95252899 | G/GA | 3.63E-5 | 210 | 16.43 | 17.03 | 12.98 | KM Plot |
| KIRP | rs71313591 | chr3:100027048 | A/G | 3.08E-5 | 211 | 16.7 | 17.8 | 4.67 | KM Plot |
| KIRP | rs71373187 | chr16:20441560 | A/T | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |